Bioinformatics and its role in the study of the evolution and probiotic potential of lactic acid bacteria

  • Mendoza, Remilyn M.; 
  • Kim, Sang Hoon; 
  • Vasquez, Robie; 
  • Hwang, In-Chan; 
  • Park, Young-Seo; 
  • 외 3명
Citations

WEB OF SCIENCE

15
Citations

SCOPUS

20

초록

Due to their numerous well-established applications in the food industry, there have been many studies regarding the adaptation and evolution of lactic acid bacteria (LAB) in a wide variety of hosts and environments. Progress in sequencing technology and continual decreases in its costs have led to the availability of LAB genome sequence data. Bioinformatics has been central to the extraction of valuable information from these raw genome sequence data. This paper presents the roles of bioinformatics tools and databases in understanding the adaptation and evolution of LAB, as well as the bioinformatics methods used in the initial screening of LAB for probiotic potential. Moreover, the advantages, challenges, and limitations of employing bioinformatics for these purposes are discussed.

키워드

Bioinformatics; Lactic acid bacteria; Comparative genomics; Adaptation and evolution; Probiotic screening; COMPLETE GENOME SEQUENCE; LACTOBACILLUS-SALIVARIUS REN; PROVIDES ACQUIRED-RESISTANCE; GENES; STRAINS; IDENTIFICATION; HOST; ANNOTATION; PREDICTION; ALIGNMENT
제목
Bioinformatics and its role in the study of the evolution and probiotic potential of lactic acid bacteria
저자
Mendoza, Remilyn M.; Kim, Sang Hoon; Vasquez, Robie; Hwang, In-Chan; Park, Young-Seo; Paik, Hyun-Dong; Moon, Gi-Seong; Kang, Dae-Kyung
DOI
10.1007/s10068-022-01142-8
발행일
2023-03
유형
Review
저널명
Food Science and Biotechnology
권
32
호
4
페이지
389 ~ 412